wwPDB Welcome to the Worldwide Protein Data Bank
Access the PDB FTP:
RCSB PDB | PDBe | PDBj
Archive Download
Chemical Component Dictionary
Biologically Interesting Molecule Reference Dictionary (BIRD)
Deposit Data to the PDB:
RCSB PDB | PDBe
PDBj | BMRB
Search for Structures:
RCSB PDB | PDBe
PDBj | BMRB
PDB Archive Snapshots:
RCSB PDB | PDBj
Instructions to Journals
Documentation
Format
Annotation and Policies
Remediation
Validation Reports
Workshops and Task Forces
X-ray Validation
NMR Validation
EM Validation
SAS Task Force
PDBx/mmCIF Working Group
PDB40
2012 Symposium
2013 Symposium
wwPDBAC
EMDB

Documentation

File Format Documentation
  • PDB File Format - Contents Guide Version 3.30 (Nov. 21, 2012)

  • PDB File Format - Contents Guide Version 3.20 (Sept 15, 2008)

  • Version 3.15 Changes from 3.20 Guide (Nov 18, 2008) PDF

  • PDB File Format - Contents Guide Version 3.1 (Feb 2008 for data released after Aug 1, 2007)
    This document lists changes from version 2.3 PDF

  • PDB File Format - Contents Guide Version 3.0 (Mar 2007 for 2007 remediation)

  • PDB File Format - Contents Guide Version 2.3 (Jul 09, 1998 for data released 1998 - Jul 2007)

  • PDB Exchange Dictionary/PDBx - version 4.0 as of Jul 2011

  • PDBML/XML - version 4.0 as of Jul 2011

  • The original Protein Data Bank Contents Guide was authored by J. Callaway, M. Cummings, B. Deroski, P. Esposito, A. Forman, P. Langdon, M. Libeson, J. McCarthy, J. Sikora, D. Xue, E. Abola, F. Bernstein, N. Manning, R. Shea, D. Stampf, and J. Sussman (1996) Brookhaven National Laboratory. Historical copies of the PDB file format from 1992 and 1996 are available.
Annotation Documentation
  • Processing Procedures Version 2.6 as of December 2012
  • Annotation Policies version 3.2 as of February 2013
  • wwPDB Statement on Retraction of PDB Entries
Chemical Component Dictionary Documentation
  • Content Description (October 4, 2011)

© wwPDB